PPDB

PPDB	The Plant Proteome Database

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AT2G37670.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

WD-40 repeat protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37670.2 11 Arabidopsis thaliana 0 903 100 100 0 (0) _
AT5G02430.1 11 Arabidopsis thaliana 0 936 59 72 3 (2) _
AT5G54200.1 11 Arabidopsis thaliana 0 890 39 55 0 (0) _
Os04g58180.1 7 Oryza sativa 2E-153 701 41 56 0 (0) _
Os02g42590.1 7 Oryza sativa 2E-152 718 41 55 0 (0) _
Os11g08400.1 7 Oryza sativa 1E-149 704 40 57 0 (0) _
Zm00001eb075850_P001 agpv5 Zea mays 8E-165 720 42 57 0 (0) _
Zm00001eb075850_P004 agpv5 Zea mays 8E-165 720 42 57 0 (0) _
GRMZM2G027049_P01 3.21 Zea mays 8E-165 720 42 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(5) ArfA(1) BBS2_Mid(3) Nup160(2) WD40(6) WD40_like(3)
TargetP:	Cytoplasm (Class 1 C0.050; M0.137; S0.044; _0.953)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	903 aa (-cTP 821)
Molecular Weight	101.34 kDA(-cTP )
PI	8.66(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1043	Detail								leaf [A. thaliana]	plastid - coIP thylakoid membrane
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1615	Detail								Natural Senescence leaf [A. thaliana]
1626	Detail								Rosettes [A. thaliana]		k1xk3
1630	Detail								Rosettes [A. thaliana]	total leaf tissue thylakoid + envelope	k1xk3
1650	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	m48
1675	Detail								Rosettes [A. thaliana]
1678	Detail								Rosettes [A. thaliana]
1679	Detail								Rosettes [A. thaliana]
1708	Detail								[A. thaliana]		Wild-type
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data