PPDB

The Plant Proteome Database

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AT2G37600.1   Ribosomal protein L36e family protein

Lab Annot. 60S ribosomal protein L36 (RPL36A)
Mapman: 29.2.1.2.2.36 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L36
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37600.2 11Arabidopsis thaliana7E-751131001003 (3)C
AT3G53740.2 11Arabidopsis thaliana8E-66112919220 (20)C
AT3G53740.3 11Arabidopsis thaliana8E-66112919220 (20)C
Os05g38520.1 7Oryza sativa1E-5511277856 (6)C
Os05g38520.2 7Oryza sativa1E-5511277856 (6)C
Os05g38520.4 7Oryza sativa1E-5511277853 (3)C
GRMZM5G850966_P03 3.21Zea mays1E-51104778638 (38)C
GRMZM5G850966_P02 3.21Zea mays1E-51104778638 (38)C
Zm00001eb289680_P002 agpv5Zea mays1E-5110477860 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2207(1) Ribosomal_L36e(1)
TargetP: Chloroplast (Class 4 C0.478; M0.200; S0.020; _0.234)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 113 aa (-cTP 65)
Molecular Weight 12.74 kDA(-cTP 7.32)
PI 11.74(-cTP 10.90)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2257Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17934214(cytosolic ribosome)
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help