PPDB

PPDB	The Plant Proteome Database

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AT2G37580.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17905.2 11 Arabidopsis thaliana 9E-16 175 31 48 0 (0) S
AT4G17905.1 11 Arabidopsis thaliana 1E-15 175 32 49 0 (0) _
AT1G20823.1 11 Arabidopsis thaliana 7E-15 131 31 46 0 (0) _
Os12g40460.1 7 Oryza sativa 8E-14 50 52 70 0 (0) M
Os04g50100.1 7 Oryza sativa 1E-13 92 40 55 0 (0) _
Os06g34620.1 7 Oryza sativa 2E-13 49 53 65 0 (0) _
v1_GRMZM2G457411_P01 4a53 Zea mays 2E-14 49 55 71 0 (0) M
Zm00001eb135320_P001 agpv5 Zea mays 2E-14 49 55 71 0 (0) M
GRMZM2G457411_P01 3.21 Zea mays 2E-14 49 55 71 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) DUF2973(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(
TargetP:	Cytoplasm (Class 1 C0.032; M0.037; S0.003; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	235 aa (-cTP 214)
Molecular Weight	25.20 kDA(-cTP )
PI	5.83(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data