PPDB

 The Plant Proteome Database

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AT2G37470.1   Histone superfamily protein
Lab Annot. histone H2B, putative
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone
Curated Location nucleus
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G53650.1 11Arabidopsis thaliana4E-7613892972 (2)_
AT3G45980.1 11Arabidopsis thaliana6E-721508285123 (122)_
AT2G28720.1 11Arabidopsis thaliana7E-721508286132 (130)_
Os08g38300.1 7Oryza sativa1E-58128788531 (31)_
Os01g62230.1 7Oryza sativa5E-5891929731 (31)_
Os01g05900.1 7Oryza sativa7E-58122808636 (36)_
GRMZM2G057852_P01 3.21Zea mays3E-601298186345 (289)_
v1_GRMZM2G057852_P01 4a53Zea mays3E-601298186254 (252)_
Zm00001eb099910_P001 agpv5Zea mays3E-6012981860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CBFD_NFYB_HMF(2) Histone(1) RP-C(2) TFIID_20kDa(1) YscO-like(1)
TargetP: Cytoplasm (Class 1 C0.094; M0.067; S0.080; _0.936)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 138 aa (-cTP 134)
Molecular Weight 15.08 kDA(-cTP )
PI 10.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
244Detail       leaf [A. thaliana] total leaf tissue clpr2-1
245Detail       leaf [A. thaliana] total leaf tissue wild-type
324Detail       leaf [A. thaliana] cell wall enriched wild-type
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1587Detail        [A. thaliana]  
1596Detail        [A. thaliana]  
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1626Detail       Rosettes [A. thaliana] k1xk3
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
1716Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19995728(proplastid (Brassica napus))

Comparative Proteomics Data

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