PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33

Lab Annot.

nucleic acid binding / nucleotide binding / zinc ion binding (RSZ33)
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

TAIR curated location: nuclear speck15686520,15133128

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G37340.5 11 Arabidopsis thaliana 4E-173 249 100 100 0 (0) _
AT2G37340.3 11 Arabidopsis thaliana 4E-173 249 100 100 5 (5) _
AT2G37340.6 11 Arabidopsis thaliana 3E-166 241 100 100 0 (0) _
Os03g17710.2 7 Oryza sativa 2E-85 157 77 87 0 (0) M
Os03g17710.1 7 Oryza sativa 2E-83 162 75 84 0 (0) M
Os05g02880.1 7 Oryza sativa 3E-83 153 77 88 0 (0) M
v1_GRMZM2G175419_P01 4a53 Zea mays 3E-84 152 78 88 10 (10) M
GRMZM2G175419_P01 3.21 Zea mays 3E-84 152 78 88 2 (2) M
Zm00001eb355350_P001 agpv5 Zea mays 3E-84 152 78 88 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C_Hendra(1) CLIP1_ZNF(1) RRM_1(1) RRM_5(1) zf-CCHC(2) zf-CCHC_2(2) zf-CCHC_3(2)
TargetP:	Mitochondria (Class 3 C0.033; M0.869; S0.013; _0.412)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	290 aa (-cTP 271)
Molecular Weight	32.89 kDA(-cTP )
PI	10.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data