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AT2G37230.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G02060.1 11 Arabidopsis thaliana 1E-108 672 32 52 0 (0) C
AT5G46100.1 11 Arabidopsis thaliana 3E-54 453 27 49 0 (0) _
AT1G30290.1 11 Arabidopsis thaliana 2E-50 707 22 43 0 (0) M
Os02g02020.1 7 Oryza sativa 0 668 47 64 2 (2) M
Os02g02950.1 7 Oryza sativa 1E-59 522 29 49 0 (0) _
Os08g01870.1 7 Oryza sativa 4E-49 572 25 47 0 (0) M
Zm00001eb229640_P001 agpv5 Zea mays 0 668 47 66 0 (0) M
v1_GRMZM2G074805_P01 4a53 Zea mays 0 668 47 66 10 (10) M
GRMZM2G074805_P01 3.21 Zea mays 0 668 47 66 10 (10) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) DUF5490(2) ECSIT(2) GlutR_dimer(2) MRP-S27(3) Mtf2(2) PPR(15) PPR_1(11)
TargetP:	Mitochondria (Class 2 C0.219; M0.883; S0.010; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	757 aa (-cTP 700)
Molecular Weight	85.70 kDA(-cTP )
PI	8.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
105	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
106	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
107	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
738	Detail								[A. thaliana]
1393	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1494	Detail								leaf [A. thaliana]
1535	Detail								leaf [A. thaliana]		wild-type
1709	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	Wild-type
1832	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Normal light
1833	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2311	Detail								leaf [A. thaliana]	PG plastoglobule
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2314	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2315	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
17293592(total seedlings û light and dark grown)
19888209(80S polysomal fraction)
20706207(contaminants cell cycle interactome (cell culture))
20061580(chloroplast envelope (inner+outer))
21533090(plasmodesmata-crude)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data