PPDB

The Plant Proteome Database

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AT2G37080.1   ROP interactive partner 3

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37080.2 11Arabidopsis thaliana05831001000 (0)C
AT2G37080.3 11Arabidopsis thaliana058399990 (0)C
AT3G53350.1 11Arabidopsis thaliana1E-10258542520 (0)C
Os05g03120.2 7Oryza sativa3E-9864338580 (0)C
Os05g03120.1 7Oryza sativa3E-9864338580 (0)C
Os05g03120.3 7Oryza sativa1E-9764239570 (0)C
Zm00001eb265540_P001 agpv5Zea mays4E-9165037560 (0)C
Zm00001eb265540_P003 agpv5Zea mays4E-9165037560 (0)C
GRMZM2G313448_P01 3.21Zea mays3E-9065037561 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APG6_N(5) ATG16(6) CALCOCO1(1) Crescentin(4) DASH_Hsk3(2) DUF1664(6) Filament(6)
TargetP: Chloroplast (Class 1 C0.921; M0.082; S0.005; _0.119)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 583 aa (-cTP 528)
Molecular Weight 65.86 kDA(-cTP 59.92)
PI 5.18(-cTP 4.92)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
339Detail       leaf [A. thaliana] chloroplast stromawild-type
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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