PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G36710.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.8.1 cell wall.pectin*esterases.PME
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36700.1 11Arabidopsis thaliana5E-13332058730 (0)_
AT1G05310.1 11Arabidopsis thaliana7E-11530752710 (0)S
AT5G19730.1 11Arabidopsis thaliana1E-9829448680 (0)S
Os09g39760.1 7Oryza sativa9E-12333749680 (0)M
Os08g10604.1 7Oryza sativa4E-11231751680 (0)S
Os05g44600.1 7Oryza sativa2E-10330348670 (0)S
Zm00001eb307670_P001 agpv5Zea mays2E-12738247660 (0)M
Zm00001eb413800_P001 agpv5Zea mays2E-11933051700 (0)S
GRMZM2G455564_P01 3.21Zea mays2E-11933051700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Pectinesterase(1) SelP_N(1)
TargetP: Secreted (Class 1 C0.006; M0.085; S0.962; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 407 aa (-cTP 380)
Molecular Weight 44.97 kDA(-cTP )
PI 6.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help