PPDB

The Plant Proteome Database

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AT2G36640.1   embryonic cell protein 63

Lab Annot. phosphotyrosine protein
Mapman: 33.2 development.late embryogenesis abundant
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36640.2 11Arabidopsis thaliana03571001000 (0)_
AT3G53040.1 11Arabidopsis thaliana5E-157490627117 (16)_
AT2G18340.1 11Arabidopsis thaliana6E-1722438460 (0)S
Os03g20680.1 7Oryza sativa9E-2217541530 (0)M
Os01g16920.1 7Oryza sativa2E-0912831510 (0)_
Os05g46480.1 7Oryza sativa4E-0718637490 (0)_
Zm00001eb395500_P002 agpv5Zea mays3E-2822045560 (0)M
GRMZM2G704475_P01 3.21Zea mays3E-2822045560 (0)M
v1_GRMZM2G704475_P01 4a53Zea mays3E-2822045560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Apolipoprotein(3) LEA_4(10) Mucin-like(2)
TargetP: Cytoplasm (Class 2 C0.110; M0.127; S0.145; _0.803)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 448 aa (-cTP 434)
Molecular Weight 48.49 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18436743(specific to seeds)
20118269(developing seeds)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help