PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G36430.1   transmembrane protein%2C putative (DUF247)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22550.2 11Arabidopsis thaliana3E-10149335540 (0)_
AT3G47250.2 11Arabidopsis thaliana9E-9946535570 (0)_
AT3G47250.3 11Arabidopsis thaliana9E-9946535570 (0)_
Os04g42650.1 7Oryza sativa1E-7450033510 (0)_
Os01g21710.1 7Oryza sativa5E-6941531510 (0)M
Os01g38120.1 7Oryza sativa3E-5941233480 (0)_
AC226227.2_FGP005 3.21Zea mays6E-7345735530 (0)_
Zm00001eb426130_P001 agpv5Zea mays6E-7345735530 (0)_
v1_AC226227.2_FGP005 4a53Zea mays6E-7345735530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APP_Cu_bd(1) DUF247(1)
TargetP: Cytoplasm (Class 3 C0.370; M0.084; S0.026; _0.845)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 448 aa (-cTP 446)
Molecular Weight 52.02 kDA(-cTP )
PI 5.46(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help