PPDB

The Plant Proteome Database

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AT2G36380.1   pleiotropic drug resistance 6

Lab Annot.
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66950.1 11Arabidopsis thaliana0145389941 (1)C
AT1G15520.1 11Arabidopsis thaliana0141059751 (1)C
AT3G16340.1 11Arabidopsis thaliana0143558740 (0)C
Os01g42410.1 7Oryza sativa0144159750 (0)M
Os02g11760.1 7Oryza sativa0146659750 (0)M
Os01g42380.1 7Oryza sativa0143360740 (0)_
GRMZM2G319138_P01 3.21Zea mays0144960760 (0)C
v1_GRMZM2G319138_P01 4a53Zea mays0144960760 (0)C
Zm00001eb419500_P002 agpv5Zea mays0144960760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(2) AAA_14(2) AAA_15(2) AAA_16(2) AAA_17(2) AAA_18(2) AAA_21(3) AAA_22(2) AAA
TargetP: Mitochondria (Class 4 C0.238; M0.649; S0.023; _0.280)
Predotar:
Subcel. Location:
TM-HMM prediction: 12 TMs
Aramemnon: 12 TMs
TAT position:
Length 1453 aa (-cTP 1426)
Molecular Weight 164.20 kDA(-cTP )
PI 7.52(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(PlasmaMembrane-LOPIT-callus)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))
20733066(phosphoproteome-ABA-leaf)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help