PPDB

 The Plant Proteome Database

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AT2G36370.1   ubiquitin-protein ligase
Lab Annot. ubiquitin-protein ligases
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62980.1 11Arabidopsis thaliana8E-0928528440 (0)_
AT4G15475.1 11Arabidopsis thaliana8E-0733024460 (0)_
Os01g73750.1 7Oryza sativa2E-5931241590 (0)_
Os12g36670.1 7Oryza sativa5E-0740725420 (0)_
Os11g42160.1 7Oryza sativa7E-0714232520 (0)_
Zm00001eb139990_P001 agpv5Zea mays8E-11561438550 (0)_
v1_GRMZM2G397948_P03 4a53Zea mays5E-8147336530 (0)C
GRMZM2G397948_P03 3.21Zea mays5E-8147336530 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BACK(2) BTB(1) LRR_4(11)
TargetP: Secreted (Class 5 C0.074; M0.029; S0.555; _0.367)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 940 aa (-cTP 885)
Molecular Weight 104.87 kDA(-cTP )
PI 5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help