PPDB

The Plant Proteome Database

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AT2G36130.1   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Lab Annot. peptidyl-prolyl cis-trans isomerase/cyclophilin (CYP18-2)
Mapman: 31.3.1 cell.cycle.peptidylprolyl isomerase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01940.1 11Arabidopsis thaliana3E-5415152682 (1)_
AT3G44600.1 11Arabidopsis thaliana2E-5115451683 (3)_
AT5G67530.1 11Arabidopsis thaliana2E-4815247691 (1)_
Os08g44520.3 7Oryza sativa3E-10216484900 (0)_
Os08g44520.2 7Oryza sativa3E-9917678840 (0)_
Os08g44520.1 7Oryza sativa4E-9015282890 (0)_
Zm00001eb039360_P001 agpv5Zea mays3E-10116482890 (0)_
Zm00001eb039360_P002 agpv5Zea mays3E-10116482890 (0)_
Zm00001eb269630_P001 agpv5Zea mays7E-5615152690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pro_isomerase(1)
TargetP: Cytoplasm (Class 3 C0.289; M0.128; S0.044; _0.834)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 141)
Molecular Weight 18.23 kDA(-cTP )
PI 8.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1506Detail        [A. thaliana]  
1507Detail        [A. thaliana] wild-type
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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