PPDB

The Plant Proteome Database

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AT2G36100.1   Uncharacterized protein family (UPF0497)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G11550.1 11Arabidopsis thaliana3E-6920759770 (0)_
AT5G06200.1 11Arabidopsis thaliana7E-6720658750 (0)_
AT2G27370.1 11Arabidopsis thaliana5E-6616962731 (1)_
Os04g38690.1 7Oryza sativa5E-4920746610 (0)_
Os06g12500.1 7Oryza sativa8E-4816747680 (0)_
Os08g01160.1 7Oryza sativa1E-4716647690 (0)_
Zm00001eb080730_P001 agpv5Zea mays3E-5016953680 (0)_
GRMZM2G080575_P01 3.21Zea mays4E-5018248660 (0)_
v1_GRMZM2G080575_P01 4a53Zea mays4E-5018248660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF588(1) FA_desaturase(1)
TargetP: Cytoplasm (Class 2 C0.293; M0.079; S0.026; _0.919)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 206 aa (-cTP 171)
Molecular Weight 21.97 kDA(-cTP )
PI 8.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help