PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G35920.1 RNA helicase family protein

Lab Annot.

RNA helicase protein
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G35920.3 11 Arabidopsis thaliana 0 995 100 100 0 (0) C
AT2G35920.2 11 Arabidopsis thaliana 0 937 100 100 0 (0) _
AT5G04895.1 11 Arabidopsis thaliana 0 971 49 68 0 (0) M
Os10g33275.1 7 Oryza sativa 0 1038 67 79 2 (2) M
Os10g33275.2 7 Oryza sativa 0 889 73 86 2 (2) _
Os03g53760.1 7 Oryza sativa 0 966 48 67 0 (0) M
Zm00001eb126070_P001 agpv5 Zea mays 0 933 48 68 0 (0) M
GRMZM2G373175_P01 3.21 Zea mays 0 933 48 68 15 (15) C
v1_GRMZM2G373175_P01 4a53 Zea mays 0 933 48 68 18 (18) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(1) DEAD(1) HA2(1) Helicase_C(1) NACHT(1) OB_NTP_bind(1) Rad17(1) T2SSE(1)
TargetP:	Cytoplasm (Class 5 C0.072; M0.571; S0.012; _0.662)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	995 aa (-cTP 947)
Molecular Weight	111.04 kDA(-cTP )
PI	8.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2216	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data