PPDB

The Plant Proteome Database

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AT2G35605.1   SWIB/MDM2 domain superfamily protein

Lab Annot. SWIB complex BAF60b domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G31760.1 11Arabidopsis thaliana1E-4210859740 (0)M
AT3G03590.1 11Arabidopsis thaliana8E-369363728 (7)C
AT3G48600.1 11Arabidopsis thaliana2E-3111051720 (0)M
Os02g03730.1 7Oryza sativa3E-31126466011 (11)M
Os12g32280.1 7Oryza sativa4E-2690536831 (31)C
Os03g55310.1 7Oryza sativa2E-2378507418 (18)C
GRMZM2G143788_P01 3.21Zea mays2E-24815571108 (107)C
v1_GRMZM2G143788_P01 4a53Zea mays2E-2481557194 (94)C
Zm00001eb264760_P001 agpv5Zea mays2E-248155710 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SWIB(1)
TargetP: Mitochondria (Class 4 C0.174; M0.569; S0.065; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 109 aa (-cTP 95)
Molecular Weight 11.95 kDA(-cTP )
PI 9.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help