PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G35420.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17920.1 11 Arabidopsis thaliana 6E-46 266 37 50 0 (0) _
AT5G46650.1 11 Arabidopsis thaliana 9E-40 264 35 49 0 (0) _
AT1G32361.1 11 Arabidopsis thaliana 1E-38 238 45 55 0 (0) _
Os10g42390.1 7 Oryza sativa 5E-22 150 36 50 0 (0) C
Os06g11450.1 7 Oryza sativa 1E-19 159 33 48 0 (0) M
Os09g29310.1 7 Oryza sativa 1E-19 150 35 51 0 (0) S
v1_GRMZM2G361902_P01 4a53 Zea mays 1E-25 190 35 48 0 (0) _
GRMZM2G361902_P01 3.21 Zea mays 1E-25 190 35 48 0 (0) _
Zm00001eb024440_P001 agpv5 Zea mays 1E-25 190 35 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(2) RINGv(1) zf-ANAPC11(1)
TargetP:	Cytoplasm (Class 4 C0.240; M0.022; S0.333; _0.533)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	254 aa (-cTP 236)
Molecular Weight	28.62 kDA(-cTP )
PI	6.29(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data