PPDB

The Plant Proteome Database

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AT2G35120.1   Single hybrid motif superfamily protein

Lab Annot. glycine cleavage system H protein, mitochondrial, putative
Mapman: 1.2.4.4 PS.photorespiration.glycine cleavage.H protein
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32470.1 11Arabidopsis thaliana1E-621686174281 (216)C
AT2G35370.1 11Arabidopsis thaliana7E-601356782302 (228)M
Os02g07410.1 7Oryza sativa1E-79155748530 (30)M
Os06g45670.1 7Oryza sativa2E-7514770850 (0)M
Os10g37180.1 7Oryza sativa6E-63164617452 (52)M
Zm00001eb233090_P001 agpv5Zea mays3E-8315276900 (0)M
Zm00001eb233090_P002 agpv5Zea mays3E-8315276900 (0)M
GRMZM2G010321_P01 3.21Zea mays3E-83152769048 (48)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Biotin_lipoyl(1) DUF2118(1) GCV_H(1) RnfC_N(1)
TargetP: Mitochondria (Class 1 C0.020; M0.879; S0.053; _0.067)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 156 aa (-cTP 137)
Molecular Weight 17.10 kDA(-cTP )
PI 4.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2261Detail       leaf [A. thaliana] stroma Clp clp trap
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17137349(ATP-binding-mitochondria cell suspension)
18385124(mitochondria - leaf and suspension cell)
18385124(mitochondria)
18814325(cotyledons)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21173025(root proteome)
21296373(mitochondria-root-leaf-differential)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help