PPDB

PPDB	The Plant Proteome Database

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AT2G34970.1 Trimeric LpxA-like enzyme

Lab Annot.

eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18300.1 11 Arabidopsis thaliana 0 726 77 87 0 (0) _
AT3G02270.1 11 Arabidopsis thaliana 0 725 69 79 0 (0) _
AT5G19485.1 11 Arabidopsis thaliana 6E-08 131 27 52 5 (0) S
Os02g56740.1 7 Oryza sativa 0 717 58 73 9 (9) _
Os02g56740.2 7 Oryza sativa 3E-164 457 55 70 1 (1) _
Os06g23160.1 7 Oryza sativa 2E-11 152 28 54 0 (0) _
Zm00001eb258570_P001 agpv5 Zea mays 0 705 58 73 0 (0) _
Zm00001eb258570_P002 agpv5 Zea mays 0 705 58 73 0 (0) _
GRMZM5G806257_P01 3.21 Zea mays 0 705 58 73 19 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CTP_transf_3(1) DUF4954(1) Fucokinase(1) Hexapep(4) Hexapep_2(3) NTP_transf_3(1)
TargetP:	Mitochondria (Class 5 C0.107; M0.458; S0.022; _0.313)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	730 aa (-cTP 718)
Molecular Weight	81.86 kDA(-cTP )
PI	4.55(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1494	Detail								leaf [A. thaliana]
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1749	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1757	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2238	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data