PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G34920.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34920.2 11Arabidopsis thaliana066697970 (0)_
AT1G30860.1 11Arabidopsis thaliana2E-17775148580 (0)_
AT4G20160.3 11Arabidopsis thaliana6E-5832939540 (0)C
Os09g39690.1 7Oryza sativa2E-2123329440 (0)_
Os02g57750.1 7Oryza sativa2E-1911141550 (0)_
Os03g01720.1 7Oryza sativa8E-1923129450 (0)_
Zm00001eb000600_P001 agpv5Zea mays3E-3053526430 (0)_
GRMZM2G028870_P01 3.21Zea mays3E-3053526430 (0)_
Zm00001eb190930_P001 agpv5Zea mays1E-2553624400 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Prok-RING_4(1) SVA(1) zf-C3HC4_3(1) zf-RING_2(1)
TargetP: Cytoplasm (Class 4 C0.047; M0.361; S0.006; _0.630)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 652 aa (-cTP 580)
Molecular Weight 73.66 kDA(-cTP )
PI 6.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help