PPDB

 The Plant Proteome Database

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AT2G34860.1   DnaJ/Hsp40 cysteine-rich domain superfamily protein
Lab Annot. PSA2 (Zn-finger J domain 4x repeats (EDA3))
Mapman: 29.8 protein.protein assembly and cofactor ligation; 1.1.9* PS.lightreaction.biogenesis
Curated Location thylakoid-peripheral-lumenal-side (Pubmed: 23198870 25228689 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34860.2 11Arabidopsis thaliana4E-13718610010064 (26)C
Os08g36140.1 7Oryza sativa6E-5918251678 (8)C
GRMZM2G021687_P01 3.21Zea mays1E-5420550628 (8)C
v1_GRMZM2G021687_P01 4a53Zea mays1E-5420550624 (4)C

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Anti-TRAP(2) DnaJ_CXXCXGXG(2) DUF5351(4) Lar_restr_allev(3)
TargetP: Chloroplast (Class 1 C0.910; M0.064; S0.018; _0.027)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position: 64
Length 186 aa (-cTP 111) (-lTP 93)
Molecular Weight 19.94 kDA(-cTP 11.89)(-lTP 10.10)
PI 9.30(-cTP 9.36)(-lTP 9.383)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
45Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2317Detail       leaf [A. thaliana] PG plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 14729914(thylakoid stripped)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data

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