PPDB

 The Plant Proteome Database

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AT2G34840.2   Coatomer epsilon subunit
Lab Annot.
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34840.1 11Arabidopsis thaliana1E-1602141001001 (0)_
AT1G30630.1 11Arabidopsis thaliana3E-1422148795193 (95)_
Os04g52270.2 7Oryza sativa2E-12921478920 (0)S
Os04g52270.1 7Oryza sativa5E-129214789241 (41)S
Os04g55200.1 7Oryza sativa1E-10721567850 (0)_
Zm00001eb430730_P001 agpv5Zea mays3E-12521476910 (0)S
GRMZM2G028929_P02 3.21Zea mays3E-1252147691117 (51)S
v1_GRMZM2G028929_P02 4a53Zea mays3E-125214769129 (29)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC3(1) Coatomer_E(1) TPR_1(3) TPR_10(2) TPR_11(1) TPR_12(3) TPR_14(1) TPR_19(
TargetP: Cytoplasm (Class 2 C0.121; M0.119; S0.138; _0.819)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 214 aa (-cTP 208)
Molecular Weight 24.08 kDA(-cTP )
PI 5.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help