PPDB

PPDB	The Plant Proteome Database

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AT2G34790.1 FAD-binding Berberine family protein

Lab Annot.

FAD-binding Berberine protein
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30760.2 11 Arabidopsis thaliana 0 505 80 91 0 (0) M
AT1G30760.1 11 Arabidopsis thaliana 0 505 80 91 1 (1) S
AT5G44400.1 11 Arabidopsis thaliana 0 529 61 78 12 (2) S
Os06g35590.1 7 Oryza sativa 6E-141 508 42 62 0 (0) S
Os06g35560.1 7 Oryza sativa 9E-140 512 44 62 0 (0) S
Os06g35650.1 7 Oryza sativa 1E-137 515 42 61 0 (0) S
GRMZM2G031941_P01 3.21 Zea mays 4E-152 504 47 64 0 (0) S
Zm00001eb384940_P001 agpv5 Zea mays 4E-152 504 47 64 0 (0) S
v1_GRMZM2G031941_P01 4a53 Zea mays 4E-152 504 47 64 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BBE(2) FAD_binding_4(1)
TargetP:	Secreted (Class 1 C0.002; M0.063; S0.989; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 484)
Molecular Weight	59.65 kDA(-cTP )
PI	6.01(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
15593128(Cell Wall proteome)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data