PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G34770.1   fatty acid hydroxylase 1
Lab Annot.
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G20870.2 11Arabidopsis thaliana1E-12523769800 (0)_
AT4G20870.1 11Arabidopsis thaliana1E-12523769800 (0)_
Os12g43363.1 7Oryza sativa8E-126237698116 (16)_
Os12g43363.2 7Oryza sativa8E-12623769817 (7)_
Os03g56820.1 7Oryza sativa8E-125237698014 (14)_
GRMZM2G038964_P02 3.21Zea mays3E-125237708115 (15)_
Zm00001eb059630_P003 agpv5Zea mays3E-12523770810 (0)_
Zm00001eb059630_P001 agpv5Zea mays3E-12523770810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Anth_synt_I_N(1) FA_hydroxylase(2)
TargetP: Cytoplasm (Class 4 C0.043; M0.055; S0.349; _0.732)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 237 aa (-cTP 166)
Molecular Weight 27.42 kDA(-cTP )
PI 9.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help