PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G34440.1   AGAMOUS-like 29

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G66656.1 11Arabidopsis thaliana5E-5417554740 (0)_
AT2G24840.1 11Arabidopsis thaliana4E-2815139630 (0)_
AT5G60440.1 11Arabidopsis thaliana2E-2515839620 (0)_
Os01g74440.1 7Oryza sativa2E-2317033550 (0)_
Os09g02830.1 7Oryza sativa2E-2317132540 (0)M
Os02g06860.1 7Oryza sativa8E-216950780 (0)_
GRMZM2G459864_P01 3.21Zea mays4E-2615939570 (0)_
v1_GRMZM2G459864_P01 4a53Zea mays4E-2615939570 (0)_
Zm00001eb414410_P001 agpv5Zea mays4E-2615939570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF16(1) EMP24_GP25L(2) Exonuc_VII_L(1) Spc7(1) SRF-TF(1) XhlA(2)
TargetP: Cytoplasm (Class 5 C0.130; M0.490; S0.029; _0.530)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 172 aa (-cTP 165)
Molecular Weight 19.75 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help