PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G34200.1   RING/FYVE/PHD zinc finger superfamily protein

Lab Annot. RING/FYVE/PHD zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34200.2 11Arabidopsis thaliana1E-1652221001000 (0)_
AT5G05830.1 11Arabidopsis thaliana4E-1512935480 (0)_
AT5G01070.1 11Arabidopsis thaliana3E-1313933460 (0)_
Os01g53130.2 7Oryza sativa1E-2012143550 (0)_
Os01g53130.1 7Oryza sativa5E-1811741520 (0)_
Os05g11720.1 7Oryza sativa3E-1612235500 (0)_
GRMZM2G082512_P02 3.21Zea mays1E-2112341550 (0)_
Zm00001eb361990_P001 agpv5Zea mays1E-2112341550 (0)_
v1_GRMZM2G082512_P02 4a53Zea mays1E-2112341550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RINGv(2)
TargetP: Cytoplasm (Class 3 C0.308; M0.070; S0.052; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 222 aa (-cTP 217)
Molecular Weight 24.66 kDA(-cTP )
PI 5.69(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help