PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G33990.1   IQ-domain 9

Lab Annot. IQ-domain 9
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15050.1 11Arabidopsis thaliana2E-7025250650 (0)C
AT5G03040.1 11Arabidopsis thaliana6E-34170416416 (13)C
AT5G03040.2 11Arabidopsis thaliana6E-34170416414 (11)C
Os06g06160.2 7Oryza sativa2E-6417557730 (0)_
Os06g06160.1 7Oryza sativa2E-6417557730 (0)_
Os06g06160.3 7Oryza sativa2E-6417557730 (0)_
Zm00001eb376600_P003 agpv5Zea mays4E-7018159750 (0)_
Zm00001eb376600_P005 agpv5Zea mays4E-7018159750 (0)_
Zm00001eb376600_P002 agpv5Zea mays4E-7018159750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP-synt_B(2) IQ(2)
TargetP: Cytoplasm (Class 5 C0.608; M0.045; S0.004; _0.625)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 263 aa (-cTP 189)
Molecular Weight 30.14 kDA(-cTP )
PI 10.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help