PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G33880.1   homeobox-3

Lab Annot.
Mapman: 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33880.2 11Arabidopsis thaliana0378991000 (0)C
AT5G45980.1 11Arabidopsis thaliana2E-7338541510 (0)C
AT3G03660.1 11Arabidopsis thaliana4E-228057710 (0)C
Os01g47710.1 7Oryza sativa7E-4613167720 (0)C
Os05g48990.1 7Oryza sativa1E-4413263710 (0)C
Os07g34880.1 7Oryza sativa5E-398384900 (0)_
Zm00001eb295920_P003 agpv5Zea mays1E-4512567760 (0)C
GRMZM2G409881_P02 3.21Zea mays1E-4512567760 (0)C
v1_GRMZM2G409881_P02 4a53Zea mays1E-4512567760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Band_3_cyto(2) DUF2464(2) Homeodomain(2) Lin-8(2) SIT(2) SR-25(1)
TargetP: Chloroplast (Class 3 C0.806; M0.339; S0.014; _0.042)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 346)
Molecular Weight 42.09 kDA(-cTP 38.33)
PI 8.89(-cTP 8.41)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(leaves)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help