PPDB

The Plant Proteome Database

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AT2G33845.1   Nucleic acid-binding%2C OB-fold-like protein

Lab Annot. Nucleic acid-binding, OB-fold-like protein
Mapman: 27 RNA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G28440.1 11Arabidopsis thaliana3E-651337183246 (149)C
AT1G23750.1 11Arabidopsis thaliana4E-6212970790 (0)_
AT1G10590.2 11Arabidopsis thaliana5E-57129658043 (30)_
Os01g13700.1 7Oryza sativa1E-66131778432 (32)C
Os01g55030.1 7Oryza sativa7E-62130728028 (28)_
Os05g15520.1 7Oryza sativa2E-60130728017 (17)_
Zm00001eb118920_P001 agpv5Zea mays7E-6113173800 (0)C
v1_GRMZM2G087103_P01 4a53Zea mays7E-61131738034 (34)C
GRMZM5G825437_P04 3.21Zea mays7E-61131738074 (50)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 2 C0.823; M0.094; S0.009; _0.182)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 182 aa (-cTP 148)
Molecular Weight 20.12 kDA(-cTP 16.28)
PI 9.39(-cTP 6.81)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1494Detail       leaf [A. thaliana]  
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
17216043(leaf)
19334764(plasma membrane (cell culture))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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