PPDB

PPDB	The Plant Proteome Database

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AT2G33840.1 Tyrosyl-tRNA synthetase%2C class Ib%2C bacterial/mitochondrial

Lab Annot.

tRNA synthetase class I (W and Y) protein
Mapman: 29.1.1 protein.aa activation.tyrosine-tRNA ligase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28350.2 11 Arabidopsis thaliana 0 371 76 91 0 (0) _
AT1G28350.1 11 Arabidopsis thaliana 0 371 76 91 3 (1) _
AT1G28350.3 11 Arabidopsis thaliana 0 378 80 89 0 (0) _
Os08g05490.1 7 Oryza sativa 0 345 72 86 11 (11) C
Os08g23110.1 7 Oryza sativa 0 346 72 85 8 (8) C
Os08g09260.1 7 Oryza sativa 9E-138 343 57 72 0 (0) _
GRMZM2G134756_P02 3.21 Zea mays 0 346 73 84 20 (20) _
Zm00001eb416340_P001 agpv5 Zea mays 0 346 73 84 0 (0) _
v1_GRMZM2G134756_P02 4a53 Zea mays 0 346 73 84 17 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	tRNA-synt_1b(1)
TargetP:	Chloroplast (Class 4 C0.701; M0.030; S0.281; _0.395)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	385 aa (-cTP 360)
Molecular Weight	43.90 kDA(-cTP 41.31)
PI	6.31(-cTP 7.98)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data