PPDB

PPDB	The Plant Proteome Database

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AT2G33610.1 switch subunit 3

Lab Annot.

switch subunit 3
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

TAIR curated location: nucleus12140326

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21700.1 11 Arabidopsis thaliana 2E-36 487 23 43 11 (11) _
AT2G47620.1 11 Arabidopsis thaliana 2E-35 494 24 45 0 (0) _
AT2G47620.2 11 Arabidopsis thaliana 1E-32 354 27 48 0 (0) _
Os02g10060.1 7 Oryza sativa 2E-120 419 44 68 0 (0) C
Os04g40420.1 7 Oryza sativa 1E-44 522 26 44 0 (0) _
Os11g08080.1 7 Oryza sativa 4E-37 489 24 47 0 (0) M
Zm00001eb206120_P001 agpv5 Zea mays 4E-117 460 42 64 0 (0) C
v1_GRMZM2G064328_P01 4a53 Zea mays 4E-117 460 42 64 0 (0) C
GRMZM2G064328_P01 3.21 Zea mays 4E-117 460 42 64 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5305(1) Myb_DNA-bind_6(1) Myb_DNA-binding(1) SWIRM(2) SWIRM-assoc_1(1) ZZ(1)
TargetP:	Chloroplast (Class 5 C0.607; M0.037; S0.040; _0.516)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	469 aa (-cTP 392)
Molecular Weight	52.41 kDA(-cTP 44.35)
PI	5.25(-cTP 5.57)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data