PPDB

 The Plant Proteome Database

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AT2G33070.1   nitrile specifier protein 2
Lab Annot. nitrile-specifier protein NSP2
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33070.2 11Arabidopsis thaliana047110010025 (15)_
AT2G33070.3 11Arabidopsis thaliana0473999925 (15)_
AT3G16400.1 11Arabidopsis thaliana04718187254 (154)_
Os09g07460.1 7Oryza sativa6E-10432949635 (5)_
Os01g19480.1 7Oryza sativa5E-1524528410 (0)M
Os07g33100.1 7Oryza sativa2E-1219026430 (0)_
Zm00001eb303740_P001 agpv5Zea mays2E-10632049630 (0)M
GRMZM2G165098_P01 3.21Zea mays2E-10532149625 (5)C
v1_GRMZM2G165098_P01 4a53Zea mays2E-10532149622 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1668(4) Jacalin(1) Kelch_1(5) Kelch_2(4) Kelch_3(7) Kelch_4(6) Kelch_5(5) Kel
TargetP: Cytoplasm (Class 2 C0.094; M0.125; S0.169; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 471 aa (-cTP 446)
Molecular Weight 51.21 kDA(-cTP )
PI 5.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2291Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

 11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
18599647(seed proteome)
18814325(cotyledons)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help