PPDB

The Plant Proteome Database

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AT2G32720.1   cytochrome B5 isoform B

Lab Annot. cytochrome B5 isoform B
Mapman: 21.2 redox.ascorbate and glutathione
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G32720.2 11Arabidopsis thaliana4E-7513482850 (0)_
AT5G48810.1 11Arabidopsis thaliana5E-661356783164 (157)_
AT5G53560.1 11Arabidopsis thaliana2E-631326284196 (183)_
Os01g73990.1 7Oryza sativa1E-77128828931 (31)_
Os05g01820.1 7Oryza sativa2E-76132778738 (38)_
Os10g37420.2 7Oryza sativa5E-57133607625 (25)_
GRMZM6G639283_P01 3.21Zea mays2E-76129798969 (69)_
Zm00001eb139860_P002 agpv5Zea mays2E-7612979890 (0)_
Zm00001eb139860_P001 agpv5Zea mays2E-7612979890 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cyt-b5(1)
TargetP: Cytoplasm (Class 2 C0.119; M0.071; S0.175; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 134 aa (-cTP 125)
Molecular Weight 15.02 kDA(-cTP )
PI 4.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19292762(Ubiquitin-affinity seedling (10 d))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help