PPDB

The Plant Proteome Database

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AT2G32670.1   vesicle-associated membrane protein 725

Lab Annot. ATVAMP725 (vesicle-associated membrane protein 725)
Mapman: 31.4 cell.vesicle transport
Curated Location
TAIR curated location: endosome & plasma membrane15876431
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G04760.2 11Arabidopsis thaliana5E-14422090960 (0)_
AT1G04760.1 11Arabidopsis thaliana5E-14422090964 (4)_
AT2G33120.1 11Arabidopsis thaliana1E-139219919776 (64)S
Os07g09600.1 7Oryza sativa8E-129219899526 (26)S
Os03g58840.1 7Oryza sativa3E-125219879419 (19)S
Os03g06960.1 7Oryza sativa3E-12221474860 (0)S
Zm00001eb116400_P002 agpv5Zea mays7E-12821989950 (0)S
GRMZM2G008919_P02 3.21Zea mays7E-128219899539 (39)S
v1_GRMZM2G008919_P02 4a53Zea mays7E-128219899529 (29)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Longin(1) RNA_pol_RpbG(2) Sigma_reg_N(2) Synaptobrevin(1)
TargetP: Secreted (Class 3 C0.017; M0.037; S0.772; _0.191)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 285 aa (-cTP 222)
Molecular Weight 32.69 kDA(-cTP )
PI 9.53(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20166762(guard cells (Arabidopsis))
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help