PPDB

The Plant Proteome Database

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AT2G32650.1   RmlC-like cupins superfamily protein

Lab Annot. similar to PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE18)
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G32650.2 11Arabidopsis thaliana5E-1021391001009 (8)C
AT2G32180.2 11Arabidopsis thaliana6E-10113998990 (0)C
AT2G32180.1 11Arabidopsis thaliana6E-10113998999 (8)C
Os02g54360.1 7Oryza sativa6E-35108577212 (12)C
Os04g36760.1 7Oryza sativa2E-1385405732 (32)C
Os02g40700.1 7Oryza sativa2E-098634510 (0)_
v1_GRMZM2G306104_P01 4a53Zea mays7E-40107597715 (15)M
GRMZM2G306104_P01 3.21Zea mays7E-40107597731 (29)M
Zm00001eb025350_P001 agpv5Zea mays7E-4010759770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cupin_2(1) Cupin_3(1) EutQ(1)
TargetP: Chloroplast (Class 4 C0.666; M0.081; S0.157; _0.389)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 107)
Molecular Weight 16.27 kDA(-cTP 12.85)
PI 8.86(-cTP 6.55)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1175Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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