PPDB

The Plant Proteome Database

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AT2G32600.1   hydroxyproline-rich glycoprotein family protein

Lab Annot. hydroxyproline-rich glycoprotein protein
Mapman: 35.1.41 not assigned.no ontology.hydroxyproline rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g15700.1 7Oryza sativa2E-12422580893 (3)_
Zm00001eb398100_P001 agpv5Zea mays2E-12721984910 (0)_
v1_GRMZM2G307906_P01 4a53Zea mays2E-12721984914 (4)_
GRMZM2G307906_P01 3.21Zea mays2E-12721984911 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CactinC_cactus(1) SF3A2(1) zf-met(1)
TargetP: Cytoplasm (Class 2 C0.115; M0.155; S0.043; _0.854)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 277 aa (-cTP 266)
Molecular Weight 31.37 kDA(-cTP )
PI 9.61(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help