PPDB

PPDB	The Plant Proteome Database

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AT2G32450.1 Calcium-binding tetratricopeptide family protein

Lab Annot.

calcium-binding EF hand protein
Mapman: 30.3 signalling.calcium

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05150.1 11 Arabidopsis thaliana 0 809 89 94 2 (2) _
AT3G04240.1 11 Arabidopsis thaliana 2E-13 267 23 40 0 (0) C
AT3G04240.2 11 Arabidopsis thaliana 5E-10 123 31 52 0 (0) _
Os03g15740.1 7 Oryza sativa 0 829 63 77 30 (30) _
Os01g68680.1 7 Oryza sativa 6E-11 299 24 39 0 (0) M
Os08g44510.1 7 Oryza sativa 1E-07 252 23 41 2 (2) _
GRMZM2G438722_P01 3.21 Zea mays 0 836 63 77 2 (2) _
v1_GRMZM2G151564_P01 4a53 Zea mays 0 826 63 76 1 (1) M
GRMZM2G151564_P01 3.21 Zea mays 0 826 63 76 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	4HB_MCP_1(1) Alkyl_sulf_dimr(2) ANAPC3(5) ANAPC5(3) BTAD(2) DP(2) EF-hand_1(2) E
TargetP:	Cytoplasm (Class 5 C0.044; M0.571; S0.040; _0.630)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	802 aa (-cTP 795)
Molecular Weight	90.23 kDA(-cTP )
PI	6.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1494	Detail								leaf [A. thaliana]
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data