PPDB

PPDB	The Plant Proteome Database

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AT2G32290.1 beta-amylase 6

Lab Annot.

beta-amylase 6 (BAM6)
Mapman: 2.2.2.1 major CHO metabolism.degradation.starch.starch cleavage

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G15210.1 11 Arabidopsis thaliana 0 496 62 78 204 (174) S
AT4G15210.4 11 Arabidopsis thaliana 0 444 63 79 0 (0) _
AT4G15210.3 11 Arabidopsis thaliana 0 444 63 79 0 (0) _
Os07g35940.1 7 Oryza sativa 0 489 61 77 0 (0) S
Os07g35880.1 7 Oryza sativa 0 495 59 74 0 (0) C
Os09g39570.1 7 Oryza sativa 2E-159 438 51 68 0 (0) C
v1_GRMZM2G058310_P01 4a53 Zea mays 0 488 60 77 37 (37) S
Zm00001eb106420_P001 agpv5 Zea mays 0 484 60 77 0 (0) _
v1_GRMZM2G112296_P04 4a53 Zea mays 0 484 60 77 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_14(1)
TargetP:	Cytoplasm (Class 4 C0.357; M0.181; S0.014; _0.600)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	577 aa (-cTP 525)
Molecular Weight	66.57 kDA(-cTP )
PI	6.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1744	Detail								[A. thaliana]		Mep-6
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data