PPDB

The Plant Proteome Database

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AT2G32230.1   proteinaceous RNase P 1

Lab Annot. PRORP1, RNaseP - dually targeted plastid and mito
Mapman: 27.1.19 RNA.processing.ribonucleases
Curated Location mitochondria (Pubmed: 23198870 20473316 )
plastid nucleoid (Pubmed: 23198870 20473316 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G32230.2 11Arabidopsis thaliana05721001000 (0)M
AT4G21900.1 11Arabidopsis thaliana2E-15549248630 (0)C
AT2G16650.1 11Arabidopsis thaliana3E-14850447650 (0)C
Os04g59600.1 7Oryza sativa2E-15536761750 (0)_
Os02g17360.2 7Oryza sativa1E-14541553690 (0)C
Os02g17360.1 7Oryza sativa1E-14541553690 (0)C
v1_GRMZM2G002642_P01 4a53Zea mays0527567110 (10)M
v1_GRMZM2G418206_P01 4a53Zea mays2E-153416506811 (11)M
GRMZM2G418206_P01 3.21Zea mays2E-153416506819 (19)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_M9_N(1) PPR(4) PPR_1(2) PPR_2(4) PPR_3(4) PPR_long(1) PRORP(1) RNase_Z
TargetP: Mitochondria (Class 3 C0.179; M0.662; S0.044; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 572 aa (-cTP 553)
Molecular Weight 64.88 kDA(-cTP )
PI 9.20(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help