PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G31970.1 DNA repair-recombination protein (RAD50)

Lab Annot.

DNA repair-recombination protein (RAD50)
Mapman: 28.2 DNA.repair

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os02g29464.1 7 Oryza sativa 0 1316 62 79 0 (0) _
Zm00001eb181120_P004 agpv5 Zea mays 0 1316 63 79 0 (0) _
GRMZM2G030128_P01 3.21 Zea mays 0 1316 63 79 0 (0) _
GRMZM2G030128_P02 3.21 Zea mays 0 1303 63 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(2) AAA_21(3) AAA_23(1) AAA_29(1) ABC_tran(3) CRISPR_Cas2(3) PI3K_P85_iSH2
TargetP:	Cytoplasm (Class 2 C0.137; M0.089; S0.124; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1316 aa (-cTP 1311)
Molecular Weight	152.81 kDA(-cTP )
PI	5.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data