PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G31960.1 glucan synthase-like 3

Lab Annot.

glucan synthase-like 3
Mapman: 3.6 minor CHO metabolism.callose

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G31960.3 11 Arabidopsis thaliana 0 1950 100 100 0 (0) _
AT2G31960.5 11 Arabidopsis thaliana 0 1950 100 100 0 (0) _
AT2G31960.2 11 Arabidopsis thaliana 0 1950 100 100 3 (3) _
Os03g03610.1 7 Oryza sativa 0 1953 69 82 0 (0) M
Os03g03610.3 7 Oryza sativa 0 1953 69 82 0 (0) M
Os03g03610.2 7 Oryza sativa 0 1953 69 82 0 (0) M
Zm00001eb271900_P003 agpv5 Zea mays 0 1950 73 84 0 (0) C
v1_GRMZM2G430680_P02 4a53 Zea mays 0 1952 73 84 7 (7) C
GRMZM2G430680_P02 3.21 Zea mays 0 1952 73 84 13 (13) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FKS1_dom1(1) Glucan_synthase(1) Vta1(1)
TargetP:	Cytoplasm (Class 5 C0.107; M0.500; S0.018; _0.526)
Predotar:
Subcel. Location:
TM-HMM prediction:	15 TMs
Aramemnon:	17 TMs
TAT position:
Length	1950 aa (-cTP 1932)
Molecular Weight	226.02 kDA(-cTP )
PI	9.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19995728(proplastid (Brassica napus))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21533090(plasmodesmata-crude)

Comparative Proteomics Data