PPDB

PPDB	The Plant Proteome Database

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AT2G31680.1 RAB GTPase homolog A5D

Lab Annot.

RAB GTPase homolog A5D
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G05810.1 11 Arabidopsis thaliana 5E-142 219 89 94 2 (2) _
AT1G05810.2 11 Arabidopsis thaliana 1E-141 219 89 94 0 (0) C
AT2G43130.1 11 Arabidopsis thaliana 5E-133 217 84 93 6 (6) _
Os08g41340.1 7 Oryza sativa 5E-121 217 77 87 11 (11) _
Os07g44040.1 7 Oryza sativa 2E-97 216 65 79 0 (0) _
Os01g54590.1 7 Oryza sativa 2E-81 209 57 75 27 (27) _
Zm00001eb036050_P001 agpv5 Zea mays 1E-122 217 78 86 0 (0) _
AC197246.3_FGP001 3.21 Zea mays 1E-122 217 78 86 4 (4) _
v1_AC197246.3_FGP001 4a53 Zea mays 1E-122 217 78 86 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_16(1) AAA_21(2) Arf(1) DUF5126(2) GTP_EFTU(1) MMR_HSR1(1) Ras(1) Roc(1) RsgA
TargetP:	Cytoplasm (Class 2 C0.074; M0.148; S0.225; _0.865)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	219 aa (-cTP 162)
Molecular Weight	24.36 kDA(-cTP )
PI	5.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data