PPDB

The Plant Proteome Database

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AT2G31160.1   LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07090.1 11Arabidopsis thaliana4E-8315671853 (0)_
AT5G58500.1 11Arabidopsis thaliana4E-7814075870 (0)C
AT3G23290.2 11Arabidopsis thaliana6E-7712692960 (0)C
Os02g56610.1 7Oryza sativa2E-7713388960 (0)_
Os02g41460.1 7Oryza sativa1E-7513983920 (0)_
Os02g07030.1 7Oryza sativa3E-7414978880 (0)_
GRMZM2G030116_P01 3.21Zea mays1E-7913279920 (0)_
Zm00001eb286430_P001 agpv5Zea mays1E-7913279920 (0)_
v1_GRMZM2G030116_P01 4a53Zea mays1E-7913279920 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF640(1) SR-25(2)
TargetP: Chloroplast (Class 5 C0.557; M0.037; S0.016; _0.486)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 219 aa (-cTP 136)
Molecular Weight 24.12 kDA(-cTP 15.19)
PI 9.93(-cTP 10.02)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help