PPDB

PPDB	The Plant Proteome Database

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AT2G30800.1 helicase in vascular tissue and tapetum

Lab Annot.

ATP binding / helicase/ nucleic acid binding (HVT1)
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G30800.2 11 Arabidopsis thaliana 0 956 100 100 0 (0) _
AT1G06670.1 11 Arabidopsis thaliana 0 1314 62 73 3 (3) _
AT1G06670.2 11 Arabidopsis thaliana 0 1289 63 75 0 (0) _
Os01g56190.1 7 Oryza sativa 0 1101 59 75 0 (0) _
Os10g33275.2 7 Oryza sativa 2E-100 499 39 57 2 (2) _
Os10g33275.1 7 Oryza sativa 9E-99 499 39 57 2 (2) M
GRMZM2G468132_P01 3.21 Zea mays 0 891 59 78 3 (2) C
Zm00001eb370170_P001 agpv5 Zea mays 0 1192 55 72 0 (0) M
Zm00001eb370170_P007 agpv5 Zea mays 0 1189 53 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_11(1) AAA_14(2) AAA_16(1) AAA_19(1) AAA_22(3) AAA_7(1) Ank_2(1) Ank_5(1) ATP
TargetP:	Cytoplasm (Class 4 C0.090; M0.336; S0.016; _0.590)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1299 aa (-cTP 1280)
Molecular Weight	144.48 kDA(-cTP )
PI	8.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data