PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G30780.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30780.2 11Arabidopsis thaliana04521001000 (0)M
AT2G48000.1 11Arabidopsis thaliana4E-13145746640 (0)M
AT5G48730.1 11Arabidopsis thaliana6E-2237224470 (0)C
Os05g33760.1 7Oryza sativa8E-10237447600 (0)M
Os03g19650.4 7Oryza sativa1E-2133824436 (6)C
Os03g19650.3 7Oryza sativa2E-21360244213 (13)C
GRMZM2G080898_P01 3.21Zea mays4E-10637446610 (0)M
Zm00001eb287820_P002 agpv5Zea mays4E-10637446610 (0)M
Zm00001eb287820_P001 agpv5Zea mays4E-10637446610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PPR(10) PPR_1(7) PPR_2(8) PPR_3(5) PPR_long(2)
TargetP: Mitochondria (Class 4 C0.038; M0.509; S0.168; _0.254)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 452 aa (-cTP 434)
Molecular Weight 52.03 kDA(-cTP )
PI 8.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help