PPDB

 The Plant Proteome Database

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AT2G30660.1   ATP-dependent caseinolytic (Clp) protease/crotonase family protein
Lab Annot. Enoyl-CoA hydratase/isomerase family
Mapman: 13.2.6.3 amino acid metabolism.degradation.aromatic aa.tryptophan
Curated Location peroxisome (Pubmed: 21487095 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30660.2 11Arabidopsis thaliana03461001000 (0)_
AT5G65940.1 11Arabidopsis thaliana0375839011 (8)_
AT5G65940.4 11Arabidopsis thaliana037583900 (0)_
Os12g16350.11 7Oryza sativa5E-179374637918 (18)M
Os12g16350.4 7Oryza sativa5E-179374637918 (18)M
Os12g16350.7 7Oryza sativa5E-179374637918 (18)M
Zm00001eb318240_P004 agpv5Zea mays1E-17737263790 (0)M
Zm00001eb116060_P001 agpv5Zea mays1E-17436263790 (0)_
v1_GRMZM2G115630_P01 4a53Zea mays2E-16935863770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CHAD(1) ECH_1(1) ECH_2(1)
TargetP: Cytoplasm (Class 5 C0.213; M0.159; S0.203; _0.334)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 370)
Molecular Weight 42.57 kDA(-cTP )
PI 8.54(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1629Detail       Rosettes [A. thaliana] Wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(mitochondria)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help