PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G30650.1   ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Lab Annot. Enoyl-CoA hydratase/isomerase family
Mapman: 13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30650.2 11Arabidopsis thaliana03171001000 (0)_
AT5G65940.1 11Arabidopsis thaliana0375808811 (8)_
AT5G65940.4 11Arabidopsis thaliana037580880 (0)_
Os12g16350.11 7Oryza sativa1E-168364617818 (18)M
Os12g16350.4 7Oryza sativa1E-168364617818 (18)M
Os12g16350.7 7Oryza sativa1E-168364617818 (18)M
Zm00001eb318240_P004 agpv5Zea mays2E-17036263780 (0)M
Zm00001eb116060_P001 agpv5Zea mays3E-15936358750 (0)_
v1_GRMZM2G115630_P01 4a53Zea mays7E-15735959740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ECH_1(1) ECH_2(1)
TargetP: Cytoplasm (Class 4 C0.227; M0.146; S0.176; _0.529)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 327)
Molecular Weight 42.26 kDA(-cTP )
PI 7.63(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(mitochondria)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help