PPDB

The Plant Proteome Database

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AT2G30520.1   Phototropic-responsive NPH3 family protein

Lab Annot. RPT2 (ROOT PHOTOTROPISM 2); protein binding
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30520.2 11Arabidopsis thaliana054510010011 (11)_
AT2G30520.3 11Arabidopsis thaliana054510010011 (11)_
AT5G67385.1 11Arabidopsis thaliana5E-143624395918 (10)C
Os11g02610.1 7Oryza sativa2E-14059642580 (0)_
Os12g02530.1 7Oryza sativa1E-13859742580 (0)_
Os12g02530.2 7Oryza sativa6E-13759842580 (0)_
v1_GRMZM2G353024_P01 4a53Zea mays4E-14660143600 (0)_
Zm00001eb093890_P001 agpv5Zea mays4E-14660143600 (0)_
GRMZM2G353024_P01 3.21Zea mays4E-14660143600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) DUF3342(1) NPH3(1)
TargetP: Cytoplasm (Class 5 C0.458; M0.067; S0.180; _0.570)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 593 aa (-cTP 578)
Molecular Weight 65.85 kDA(-cTP )
PI 7.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to leaves)

Comparative Proteomics Data


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