PPDB

The Plant Proteome Database

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AT2G29980.1   fatty acid desaturase 3

Lab Annot.
Mapman: 11.2.3 lipid metabolism.FA desaturation.omega 3 desaturase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29980.2 11Arabidopsis thaliana02751001000 (0)_
AT5G05580.1 11Arabidopsis thaliana035771830 (0)C
AT3G11170.1 11Arabidopsis thaliana0358698318 (18)C
Os07g49310.1 7Oryza sativa037268794 (4)M
Os03g18070.1 7Oryza sativa0343728249 (49)M
Os12g01370.1 7Oryza sativa035468830 (0)_
Zm00001eb397050_P002 agpv5Zea mays034872830 (0)M
v1_GRMZM2G129209_P01 4a53Zea mays035371832 (2)M
Zm00001eb111980_P002 agpv5Zea mays035371830 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3474(1) FA_desaturase(1)
TargetP: Cytoplasm (Class 2 C0.024; M0.231; S0.031; _0.956)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 386 aa (-cTP 383)
Molecular Weight 44.08 kDA(-cTP )
PI 8.47(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help