PPDB

PPDB	The Plant Proteome Database

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AT2G29580.1 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G07360.1 11 Arabidopsis thaliana 0 494 81 86 1 (1) _
AT5G07060.2 11 Arabidopsis thaliana 2E-163 397 62 72 0 (0) _
AT5G07060.1 11 Arabidopsis thaliana 2E-160 394 62 73 0 (0) _
Os06g07350.1 7 Oryza sativa 0 386 76 86 2 (2) _
Os07g18050.1 7 Oryza sativa 0 386 75 86 2 (2) _
Os04g37690.1 7 Oryza sativa 1E-10 80 40 62 4 (4) C
Zm00001eb375430_P003 agpv5 Zea mays 0 436 69 80 0 (0) _
Zm00001eb375430_P002 agpv5 Zea mays 0 422 70 81 0 (0) _
GRMZM5G831993_P02 3.21 Zea mays 0 422 70 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RRM_1(1) RRM_3(1) RRM_occluded(1) Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_3(1)
TargetP:	Cytoplasm (Class 2 C0.072; M0.276; S0.052; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	483 aa (-cTP 410)
Molecular Weight	54.25 kDA(-cTP )
PI	7.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data